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Transomic Technologies Inc endogenous cb5
<t>CB5</t> and CB5LP homologs of Viridiplantae and Red algae were obtained using AtCB5D and AtCB5LP as queries via BLASTP search against Phytozome ( C. reinhardtii , V. carteri , M. polymorpha , P. patens , S. moellendorffii , C. richardii , A. trichopoda , O. sativa , and P. trichocarpa ), FernBase ( S. cucullata ), Genbank ( P. purpureum , G. domingensis , R. marinus , C. caldarium , G. chorda , and C. merolae ), ONEKP ( C. vulgaris , P. radiata , and G. biloba ), and Solanaceae Genomics Network ( P. axillaris ). Metazoa, Fungi, and Bacteria CB5 and CB5LP homologs were obtained using AtCB5LP as query via BLASTP search against Clustered nr (nr_clustered) database. Maximum likelihood tree was constructed with full-length proteins using IQ-tree2 algorithm (Q.pfam+R6 model selected by ModelFinder, 1000 SH-aLRT tests, and 1000 ultrafast bootstraps). Only major bifurcate bootstrap support values are marked on the main branches. Bacterial proteins with and without a single TM domain are symbolized with stars and dots, respectively. The scale bar indicates average number of amino acid substitutions per site.
Endogenous Cb5, supplied by Transomic Technologies Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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<t>CB5</t> and CB5LP homologs of Viridiplantae and Red algae were obtained using AtCB5D and AtCB5LP as queries via BLASTP search against Phytozome ( C. reinhardtii , V. carteri , M. polymorpha , P. patens , S. moellendorffii , C. richardii , A. trichopoda , O. sativa , and P. trichocarpa ), FernBase ( S. cucullata ), Genbank ( P. purpureum , G. domingensis , R. marinus , C. caldarium , G. chorda , and C. merolae ), ONEKP ( C. vulgaris , P. radiata , and G. biloba ), and Solanaceae Genomics Network ( P. axillaris ). Metazoa, Fungi, and Bacteria CB5 and CB5LP homologs were obtained using AtCB5LP as query via BLASTP search against Clustered nr (nr_clustered) database. Maximum likelihood tree was constructed with full-length proteins using IQ-tree2 algorithm (Q.pfam+R6 model selected by ModelFinder, 1000 SH-aLRT tests, and 1000 ultrafast bootstraps). Only major bifurcate bootstrap support values are marked on the main branches. Bacterial proteins with and without a single TM domain are symbolized with stars and dots, respectively. The scale bar indicates average number of amino acid substitutions per site.
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Addgene inc backbone plasmid
<t>CB5</t> and CB5LP homologs of Viridiplantae and Red algae were obtained using AtCB5D and AtCB5LP as queries via BLASTP search against Phytozome ( C. reinhardtii , V. carteri , M. polymorpha , P. patens , S. moellendorffii , C. richardii , A. trichopoda , O. sativa , and P. trichocarpa ), FernBase ( S. cucullata ), Genbank ( P. purpureum , G. domingensis , R. marinus , C. caldarium , G. chorda , and C. merolae ), ONEKP ( C. vulgaris , P. radiata , and G. biloba ), and Solanaceae Genomics Network ( P. axillaris ). Metazoa, Fungi, and Bacteria CB5 and CB5LP homologs were obtained using AtCB5LP as query via BLASTP search against Clustered nr (nr_clustered) database. Maximum likelihood tree was constructed with full-length proteins using IQ-tree2 algorithm (Q.pfam+R6 model selected by ModelFinder, 1000 SH-aLRT tests, and 1000 ultrafast bootstraps). Only major bifurcate bootstrap support values are marked on the main branches. Bacterial proteins with and without a single TM domain are symbolized with stars and dots, respectively. The scale bar indicates average number of amino acid substitutions per site.
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<t>CB5</t> and CB5LP homologs of Viridiplantae and Red algae were obtained using AtCB5D and AtCB5LP as queries via BLASTP search against Phytozome ( C. reinhardtii , V. carteri , M. polymorpha , P. patens , S. moellendorffii , C. richardii , A. trichopoda , O. sativa , and P. trichocarpa ), FernBase ( S. cucullata ), Genbank ( P. purpureum , G. domingensis , R. marinus , C. caldarium , G. chorda , and C. merolae ), ONEKP ( C. vulgaris , P. radiata , and G. biloba ), and Solanaceae Genomics Network ( P. axillaris ). Metazoa, Fungi, and Bacteria CB5 and CB5LP homologs were obtained using AtCB5LP as query via BLASTP search against Clustered nr (nr_clustered) database. Maximum likelihood tree was constructed with full-length proteins using IQ-tree2 algorithm (Q.pfam+R6 model selected by ModelFinder, 1000 SH-aLRT tests, and 1000 ultrafast bootstraps). Only major bifurcate bootstrap support values are marked on the main branches. Bacterial proteins with and without a single TM domain are symbolized with stars and dots, respectively. The scale bar indicates average number of amino acid substitutions per site.
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<t>CB5</t> and CB5LP homologs of Viridiplantae and Red algae were obtained using AtCB5D and AtCB5LP as queries via BLASTP search against Phytozome ( C. reinhardtii , V. carteri , M. polymorpha , P. patens , S. moellendorffii , C. richardii , A. trichopoda , O. sativa , and P. trichocarpa ), FernBase ( S. cucullata ), Genbank ( P. purpureum , G. domingensis , R. marinus , C. caldarium , G. chorda , and C. merolae ), ONEKP ( C. vulgaris , P. radiata , and G. biloba ), and Solanaceae Genomics Network ( P. axillaris ). Metazoa, Fungi, and Bacteria CB5 and CB5LP homologs were obtained using AtCB5LP as query via BLASTP search against Clustered nr (nr_clustered) database. Maximum likelihood tree was constructed with full-length proteins using IQ-tree2 algorithm (Q.pfam+R6 model selected by ModelFinder, 1000 SH-aLRT tests, and 1000 ultrafast bootstraps). Only major bifurcate bootstrap support values are marked on the main branches. Bacterial proteins with and without a single TM domain are symbolized with stars and dots, respectively. The scale bar indicates average number of amino acid substitutions per site.
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<t>CB5</t> and CB5LP homologs of Viridiplantae and Red algae were obtained using AtCB5D and AtCB5LP as queries via BLASTP search against Phytozome ( C. reinhardtii , V. carteri , M. polymorpha , P. patens , S. moellendorffii , C. richardii , A. trichopoda , O. sativa , and P. trichocarpa ), FernBase ( S. cucullata ), Genbank ( P. purpureum , G. domingensis , R. marinus , C. caldarium , G. chorda , and C. merolae ), ONEKP ( C. vulgaris , P. radiata , and G. biloba ), and Solanaceae Genomics Network ( P. axillaris ). Metazoa, Fungi, and Bacteria CB5 and CB5LP homologs were obtained using AtCB5LP as query via BLASTP search against Clustered nr (nr_clustered) database. Maximum likelihood tree was constructed with full-length proteins using IQ-tree2 algorithm (Q.pfam+R6 model selected by ModelFinder, 1000 SH-aLRT tests, and 1000 ultrafast bootstraps). Only major bifurcate bootstrap support values are marked on the main branches. Bacterial proteins with and without a single TM domain are symbolized with stars and dots, respectively. The scale bar indicates average number of amino acid substitutions per site.
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Figure 6. The effect of receptor blockers on the effect of 2-ADFP (EC50-EC70) combination with LPI (5 µM) on breast cancer cell line viability. The following substances and concentrations were used: CB1, SR 141716A (100 nM); CB2, SR 144528 (100 nM); GPR55, ML-193 (2 µM); GPR18, <t>PSB</t> <t>CB5</t> (3 µM); and TRPV1, capsazepine (5 µM). Incubation time 72 h, resazurin test, mean ± standard error (N = 4 experiments). (A) MCF-10A, (B) MCF-7, (C) BT-474, (D) SK-BR-3, (E) BT-20, and (F) MDA-MB- 231. *, a statistically significant difference from 2-ADFP alone, p ≤0.05, ANOVA with Holm–Sidak post-test.
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Image Search Results


CB5 and CB5LP homologs of Viridiplantae and Red algae were obtained using AtCB5D and AtCB5LP as queries via BLASTP search against Phytozome ( C. reinhardtii , V. carteri , M. polymorpha , P. patens , S. moellendorffii , C. richardii , A. trichopoda , O. sativa , and P. trichocarpa ), FernBase ( S. cucullata ), Genbank ( P. purpureum , G. domingensis , R. marinus , C. caldarium , G. chorda , and C. merolae ), ONEKP ( C. vulgaris , P. radiata , and G. biloba ), and Solanaceae Genomics Network ( P. axillaris ). Metazoa, Fungi, and Bacteria CB5 and CB5LP homologs were obtained using AtCB5LP as query via BLASTP search against Clustered nr (nr_clustered) database. Maximum likelihood tree was constructed with full-length proteins using IQ-tree2 algorithm (Q.pfam+R6 model selected by ModelFinder, 1000 SH-aLRT tests, and 1000 ultrafast bootstraps). Only major bifurcate bootstrap support values are marked on the main branches. Bacterial proteins with and without a single TM domain are symbolized with stars and dots, respectively. The scale bar indicates average number of amino acid substitutions per site.

Journal: Science Advances

Article Title: A plant-specific cytochrome b 5 –like protein is essential for phytosterol biosynthesis

doi: 10.1126/sciadv.ady1719

Figure Lengend Snippet: CB5 and CB5LP homologs of Viridiplantae and Red algae were obtained using AtCB5D and AtCB5LP as queries via BLASTP search against Phytozome ( C. reinhardtii , V. carteri , M. polymorpha , P. patens , S. moellendorffii , C. richardii , A. trichopoda , O. sativa , and P. trichocarpa ), FernBase ( S. cucullata ), Genbank ( P. purpureum , G. domingensis , R. marinus , C. caldarium , G. chorda , and C. merolae ), ONEKP ( C. vulgaris , P. radiata , and G. biloba ), and Solanaceae Genomics Network ( P. axillaris ). Metazoa, Fungi, and Bacteria CB5 and CB5LP homologs were obtained using AtCB5LP as query via BLASTP search against Clustered nr (nr_clustered) database. Maximum likelihood tree was constructed with full-length proteins using IQ-tree2 algorithm (Q.pfam+R6 model selected by ModelFinder, 1000 SH-aLRT tests, and 1000 ultrafast bootstraps). Only major bifurcate bootstrap support values are marked on the main branches. Bacterial proteins with and without a single TM domain are symbolized with stars and dots, respectively. The scale bar indicates average number of amino acid substitutions per site.

Article Snippet: Constructs were transformed into a yeast strain deficient in its endogenous CB5 ( cyb5 , MAT-a, Transomic), and positive colonies were selected on auxotrophic yeast medium lacking uracil.

Techniques: Algae, Bacteria, Construct

Figure 6. The effect of receptor blockers on the effect of 2-ADFP (EC50-EC70) combination with LPI (5 µM) on breast cancer cell line viability. The following substances and concentrations were used: CB1, SR 141716A (100 nM); CB2, SR 144528 (100 nM); GPR55, ML-193 (2 µM); GPR18, PSB CB5 (3 µM); and TRPV1, capsazepine (5 µM). Incubation time 72 h, resazurin test, mean ± standard error (N = 4 experiments). (A) MCF-10A, (B) MCF-7, (C) BT-474, (D) SK-BR-3, (E) BT-20, and (F) MDA-MB- 231. *, a statistically significant difference from 2-ADFP alone, p ≤0.05, ANOVA with Holm–Sidak post-test.

Journal: International journal of molecular sciences

Article Title: Two-Step Cell Death Induction by the New 2-Arachidonoyl Glycerol Analog and Its Modulation by Lysophosphatidylinositol in Human Breast Cancer Cells.

doi: 10.3390/ijms26020820

Figure Lengend Snippet: Figure 6. The effect of receptor blockers on the effect of 2-ADFP (EC50-EC70) combination with LPI (5 µM) on breast cancer cell line viability. The following substances and concentrations were used: CB1, SR 141716A (100 nM); CB2, SR 144528 (100 nM); GPR55, ML-193 (2 µM); GPR18, PSB CB5 (3 µM); and TRPV1, capsazepine (5 µM). Incubation time 72 h, resazurin test, mean ± standard error (N = 4 experiments). (A) MCF-10A, (B) MCF-7, (C) BT-474, (D) SK-BR-3, (E) BT-20, and (F) MDA-MB- 231. *, a statistically significant difference from 2-ADFP alone, p ≤0.05, ANOVA with Holm–Sidak post-test.

Article Snippet: SR 144028, PSB CB5, ML-184, ML-193, capsazepine, and LPI was from Tocris Biosci- ence, Bristol, UK.

Techniques: Incubation